Created in James Madison University's ISAT 341 Simulation and Modeling course by Joseph Straub and Andrew Funkhouser. Based on Mark Heffernan's Glucose-Insulin Insight Maker
Glucose Insulin Model Info:
Translated from Hormone.stm in Dynamic Modeling in the Health Sciences James L hargrove, Springer 1998, Ch 24 p255-261, by Mark Heffernan.
Glucose-Insulin Model in Type 1 Diabetes
Based on Psychological Medicine Dec 2015 article Depression as a systemic syndrome: mapping the feedback loops of major depressive disorder by A. K. Wittenborn, H. Rahmandad, J. Rick and N. Hosseinichimeh, mentioned here
Clone of Depression Dynamics
WIP representation of thinking feeling acting and interacting
Human behaviour
Based on Psychological Medicine Dec 2015 article Depression as a systemic syndrome: mapping the feedback loops of major depressive disorder by A. K. Wittenborn, H. Rahmandad, J. Rick and N. Hosseinichimeh, mentioned here. See also 2018 N. Hosseinichimeh Plos ONE article for rumination focussed SD simulation
Depression Dynamics
Gross theory of emotion regulation from Saras Chung ISDC 2015
Abstract See also Tibor Bosse's Computational model paper
Emotion Regulation and Stress
Addition of glucagon hormone action to control glucose homeostasis extended from IM-586
Glucose regulation CLD 2
WIP Based on Carlos E Perez twitter diagrams and Paul Cisek 2019 paper and talks including explore and exploit behaviours
Brain control circuit evolution
Minimal model of glucose kinetics by Bergman, used to calculate insulin sensitivity from an Intravenous Glucose Tolerance Test (IVGTT). Plasma insulin I(t) enters a remote compartment X(t) where it is active in accelerating glucose G(t) disappearance into the periphery and liver, and inhibiting hepatic glucose production. Adapted from Minimal Models for Glucose and Insulin Kinetics: A Matlab implementation by Natal van Riel, Eindhoven University of Technology 2004 by Mark Heffernan.
V1 Glucose minimal model
Created in James Madison University's ISAT 341 Simulation and Modeling course by Joseph Straub and Andrew Funkhouser. Based on Mark Heffernan's Glucose-Insulin Insight Maker
Glucose Insulin Model Info:
Translated from Hormone.stm in Dynamic Modeling in the Health Sciences James L hargrove, Springer 1998, Ch 24 p255-261, by Mark Heffernan.
Type 1 Diabetes
Addition of glucagon hormone action to control glucose homeostasis extended from IM-586
Clone of Glucose regulation CLD 2
WIP Thyroid HPA axis dynamics based on Kohanin 2022 article and Ch3.5 of Uri Alon's System Medicine book. A series of secrete and grow physiological circuits
Thyroid dynamics
WIP representation of thinking feeling acting and interacting
Clone of Human behaviour
Created in James Madison University's ISAT 341 Simulation and Modeling course by Joseph Straub and Andrew Funkhouser. Based on Mark Heffernan's Glucose-Insulin Insight Maker
Glucose Insulin Model Info:
Translated from Hormone.stm in Dynamic Modeling in the Health Sciences James L hargrove, Springer 1998, Ch 24 p255-261, by Mark Heffernan.
Clone of Clone of Glucose-Insulin Model in Type 1 Diabetes
Created in James Madison University's ISAT 341 Simulation and Modeling course by Joseph Straub and Andrew Funkhouser. Based on Mark Heffernan's Glucose-Insulin Insight Maker
Glucose Insulin Model Info:
Translated from Hormone.stm in Dynamic Modeling in the Health Sciences James L hargrove, Springer 1998, Ch 24 p255-261, by Mark Heffernan.
Clone of Glucose-Insulin Model in Type 1 Diabetes
Explanation of delays in treatment effect and rebound effects on cessation of anti-depressant SSRI drugs based on Andrews
Anti-depressants and oppositional perturbation
Small Intestine example from Progress in Biophysics & Molecular Biology Special Issue 2016 From the century of the genome to the century of the organism: New theoretical approaches paper on organization. Compare with Bogdanov (click tag)
Biology Principles of Organization and Variation 1
Attempt to clarify the differences in the energy balance and carbohydrate insulin obesity models described in Speakman and Hall's 2021 science article See also Nature Metabolism Obesity Causal Model Differences 2024 article and insight
Body weight regulation models
Diagrams from Greene 2017 nejm article Putting the patient back together Social Medicine, Network Medicine, and the Limits of Reductionism
Network medicine
Based on Psychological Medicine Dec 2015 article Depression as a systemic syndrome: mapping the feedback loops of major depressive disorder by A. K. Wittenborn, H. Rahmandad, J. Rick and N. Hosseinichimeh, mentioned here
Clone of Depression Dynamics
Based on Psychological Medicine Dec 2015 article Depression as a systemic syndrome: mapping the feedback loops of major depressive disorder by A. K. Wittenborn, H. Rahmandad, J. Rick and N. Hosseinichimeh, mentioned here
Clone of Clone of Depression Dynamics
Addition of glucagon hormone action to control glucose homeostasis extended from IM-586
Clone of Clone of Glucose regulation CLD 2
WIP Perceptual Control Hierarchy of Needs linked to Mental Health using suicide crisis as an example based on Mansell 2021 pct and psychopathology paper Macintyre2021 pct and suicide crisis paper and Carey2014 Method of Levels paper. See also Cisek and Perez brain control circuit evolution IM
Linking pct to brain and social self evolution
WIP based on WHO Decade of Healthy Ageing baseline report 2020 Annex
WHO Healthy Ageing
Based on Psychological Medicine Dec 2015 article Depression as a systemic syndrome: mapping the feedback loops of major depressive disorder by A. K. Wittenborn, H. Rahmandad, J. Rick and N. Hosseinichimeh, mentioned here
Clone of Depression Dynamics