Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Michal Kotrc
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 5 years 11 months ago
Clone of Oyster Growth based on Phytoplankton Biomass
Francisco Xavier
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 7 years 4 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Luisa Lopera
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Laura Rodriguez
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Laura Catalina Cantor Acosta
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Maria Camila Angel
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of Oyster Growth based on Phytoplankton Biomass
Ismael Costa
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 7 years 4 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Maria Camila Angel
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of Phyto 1 - PI curve for phytoplankton
Francisco Xavier
The equation is:
Ppot = Pmax I/Iopt exp(1-I/Iopt)
Where:
Ppot: Potential production (e.g. d-1, or mg C m-2 d-1)
Pmax: Maximum production (same units as Ppot)
I: Light energy at depth of interest (e.g. uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (same units as I)
The model contains no state variables, just illustrates the rate of production, by making the value of I equal to the timestep (in days). Move the slider to the left for more pronounced photoinhibition, to the right for photosaturation.
- 7 years 5 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Yuley Cardona
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 11 months 2 weeks ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Diana Cristina Cardona Duque
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of Clone of Oyster Growth based on Phytoplankton Biomass
Joana Ferreira Cardoso
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 6 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Linda Berrio
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Carlos Bonilla
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of Phyto 1 - PI curve for phytoplankton
Joaomz
The equation is:
Ppot = Pmax I/Iopt exp(1-I/Iopt)
Where:
Ppot: Potential production (e.g. d-1, or mg C m-2 d-1)
Pmax: Maximum production (same units as Ppot)
I: Light energy at depth of interest (e.g. uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (same units as I)
The model contains no state variables, just illustrates the rate of production, by making the value of I equal to the timestep (in days). Move the slider to the left for more pronounced photoinhibition, to the right for photosaturation.
- 6 years 8 months ago
Clone of Clone of Oyster Growth based on Phytoplankton Biomass
António Delgado
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 6 years 8 months ago
Clone of Phytoplankton model URI
Sara Gomes
Potential primary production uses Steele's equation and a Michaelis-Menten (or Monod) function for nutrient limitation. Respiratory losses are only a function of biomass.
- 5 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Alhambra
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 7 years 5 hours ago
Clone of Clone of Oyster Growth based on Phytoplankton Biomass
Bechara Assouad
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Modèle simple pour illustrer la croissance des huîtres sur la base de la production primaire de phytoplancton comme une variable d'état, forcé par la lumière et les éléments nutritifs, en cours d'exécution pour une période annuelle.
La croissance du phytoplancton sur la base de Steele et équations de Michaelis-Menten), où:
Production primaire = (([Pmax] * [I] / [Iopt] * exp (1 - [I] / [Iopt]) * [S]) / ([K] + [S]))
Pmax: production maximale (d-1)
I: L'énergie lumineuse en profondeur de l'intérêt (Ue m-2 s-1)
Iopt: L'énergie lumineuse à laquelle se produit Pmax (Ue m-2 s-1)
S: concentration des éléments nutritifs (N umol L-1)
KS: Demi constants de saturation en nutriments (N umol L-1).
D'autres développements:
- Les éléments nutritifs comme variable d'état dans le cycle de détritus de phytoplancton et d'huîtres de la biomasse.
- Lumière limitée par la concentration de phytoplancton.
- Effet de la température sur le phytoplancton et la croissance des huîtres.
Environment Phytoplankton Primary Production Bivalves Growth
- 7 years 2 weeks ago
Clone of Oyster Growth based on Phytoplankton Biomass
Francisco Xavier
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 7 years 4 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Diana Cristina Cardona Duque
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Carlos Bonilla
It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.
The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:
Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.
This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Environment Primary Production Phytoplankton Biogeochemistry Ocean
- 4 years 8 months ago
Clone of micro algae , biogas , bioelectrcidades
Pagandai V Pannirselvam
Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.
Environment Phytoplankton Primary Production Bivalves Growth
- 3 years 7 months ago
Clone of Clone of Clone3f micro algae , biogas and bioelectricity
Mark Nickelo Blanco
The biomass model uses an example, Phytoplankton growth based on Steele's and Michaelis-Menten equations), where:
Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))
Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).
Once this is understood, it looks upon the viability of biogas production from the microalgae biomass.
Environment Phytoplankton Primary Production Bivalves Growth
- 3 years 7 months ago