Spring, 2020: in the midst of on-line courses, due to the pandemic of Covid-19.
With the onset of the Covid-19 coronavirus crisis, we focus on SIRD models, which might realistically model the course of the disease.
We start with an SIR model, such as that featured in the MAA model featured in
https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Without mortality, with time measured in days, with infection rate 1/2, recovery rate 1/3, and initial infectious population I_0=1.27x10-4, we reproduce their figure
With a death rate of .005 (one two-hundredth of the infected per day), an infectivity rate of 0.5, and a recovery rate of .145 or so (takes about a week to recover), we get some pretty significant losses -- about 3.2% of the total population.
Resources:
- http://www.nku.edu/~longa/classes/2020spring/mat375/mathematica/SIRModel-MAA.nb
- https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Clone of Coronavirus: A Simple SIR (Susceptible, Infected, Recovered) with death
SARS-CoV-19 spread in different countries
- please
adjust variables accordingly
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
Clone of SARS-CoV-19 model
This System Model presents the cases of COVID-19 in Puerto Princesa City as of June 3, 2021
Insight Author: Pia Mae M. Palay
Clone of System Dynamic Model of COVID 19 in Puerto Princesa City
SARS-CoV-19 spread in different countries
- please
adjust variables accordingly
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
Clone of SARS-CoV-19 model
A sample model for class discussion modeling COVID-19 outbreaks and responses from government with the effect on the local economy. Govt policy is dependent on reported COVID-19 cases, which in turn depend on testing rates less those who recover
Assumptions
Govt policy reduces infection and economic growth in the same way.
Govt policy is trigger when reported COVID-19 case are 10 or less.
A greater number of COVID-19 cases has a negative effect on the economy. This is due to economic signalling that all is not well.
Interesting insights
Higher testing rates seem to trigger more rapid government intervention, which reduces infectious cases. The impact on the economy though of higher detected cases though is negative.
Clone of Burnie COVID-19 outbreak demo model version 2
A sample model for class discussion modeling COVID-19 outbreaks and responses from government with the effect on the local economy. Govt policy is dependent on reported COVID-19 cases, which in turn depend on testing rates less those who recover
Assumptions
Govt policy reduces infection and economic growth in the same way.
Govt policy is trigger when reported COVID-19 case are 10 or less.
A greater number of COVID-19 cases has a negative effect on the economy. This is due to economic signalling that all is not well.
Interesting insights
Higher testing rates seem to trigger more rapid government intervention, which reduces infectious cases. The impact on the economy though of higher detected cases though is negative.
Clone of Burnie COVID-19 outbreak demo model version 2
SARS-CoV-19 spread in different countries
- please
adjust variables accordingly
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
Clone of Clone of SARS-CoV-19 model
SARS-CoV-19 spread in different countries
- please
adjust variables accordingly
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
Clone of SARS-CoV-19 model
Modelling of the SARS-Cov-2 viral outbreak using an SEIR model plus specific extensions to model demand for health and care resources.
The model includes biths and deaths, and migration to accommodate import and export of infected individuals from other areas.
Healthcare resources identifies need for hospital beds and critical care.
The model is uses arrays to reflect the different impacts of modelled parameters by age and sex.
Clone of Infectious Disease Model (Covid)
A sample model for class discussion modeling COVID-19 outbreaks and responses from government with the effect on the local economy. Govt policy is dependent on reported COVID-19 cases, which in turn depend on testing rates less those who recover
Assumptions
Govt policy reduces infection and economic growth in the same way.
Govt policy is trigger when reported COVID-19 case are 10 or less.
A greater number of COVID-19 cases has a negative effect on the economy. This is due to economic signalling that all is not well.
Interesting insights
Higher testing rates seem to trigger more rapid government intervention, which reduces infectious cases. The impact on the economy though of higher detected cases though is negative.
Clone of Burnie COVID-19 outbreak demo model version 2
Spring, 2020: in the midst of on-line courses, due to the pandemic of Covid-19.
With the onset of the Covid-19 coronavirus crisis, we focus on SIRD models, which might realistically model the course of the disease.
We start with an SIR model, such as that featured in the MAA model featured in
https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Without mortality, with time measured in days, with infection rate 1/2, recovery rate 1/3, and initial infectious population I_0=1.27x10-4, we reproduce their figure
With a death rate of .005 (one two-hundredth of the infected per day), an infectivity rate of 0.5, and a recovery rate of .145 or so (takes about a week to recover), we get some pretty significant losses -- about 3.2% of the total population.
Resources:
- http://www.nku.edu/~longa/classes/2020spring/mat375/mathematica/SIRModel-MAA.nb
- https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Clone of Clone of Coronavirus: A Simple SIR (Susceptible, Infected, Recovered) with death
Spring, 2020: in the midst of on-line courses, due to the pandemic of Covid-19.
With the onset of the Covid-19 coronavirus crisis, we focus on SIRD models, which might realistically model the course of the disease.
We start with an SIR model, such as that featured in the MAA model featured in
https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Without mortality, with time measured in days, with infection rate 1/2, recovery rate 1/3, and initial infectious population I_0=1.27x10-4, we reproduce their figure
With a death rate of .005 (one two-hundredth of the infected per day), an infectivity rate of 0.5, and a recovery rate of .145 or so (takes about a week to recover), we get some pretty significant losses -- about 3.2% of the total population.
Resources:
- http://www.nku.edu/~longa/classes/2020spring/mat375/mathematica/SIRModel-MAA.nb
- https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model
Clone of Coronavirus: A Simple SIR (Susceptible, Infected, Recovered) with death
The SEIRS(D) model for the purpose of experimenting with the phenomena of viral spread. I use it for COVID-19 simulation.
Clone of SEIR - COVID-19 (v.1)
This System Model presents the cases of COVID-19 in Puerto Princesa City as of June 3, 2021
Insight Author: Pia Mae M. Palay
Clone of System Dynamic Model of COVID 19 in Puerto Princesa City
Dieses Causal
Loop Diagramm (CLD) versucht in vereinfachter Weisse die Wesentliche Dynamik des
Mars-CoV-2 zu veranschaulichen. Der Motor hinter den Infektionen ist offensichtlich
eine selbstverstärkende Rückkopplungsschleife, und ausschlaggebend in diesem
Bezug ist der R-Wert. Wenn der R-Wert unter 1 liegt, dann heisst das, dass eine
infizierte Person während des Zeitraums, in dem sie infektiös ist, weniger als
eine andere Person infiziert. Liegt der
Wert über 1, dann steckt die Infizierte mehr als eine andere Person an, und das
Virus verbreitet sich exponentiell. Die Schleifen, die blaue Pfeile enthalten, sind negative Rückkopplungsschleifen – sie bremsen die Verbreitung des Virus. Das
Diagramm suggeriert, dass der R-Wert als Schlüssel zur Kontrolle der Verbreitung
des Virus dienen könnte. Sollte der Wert über 1 steigen, so müssten Schutzmassnahem eingeführt werden. Ist der
Wert unter 1, dann sind die negativen Schleifen dominierend und einige Massnahmen könnten gelockert werden.
Eine Systemische Sicht auf Covid-19
This System Model presents the cases of COVID-19 in Puerto Princesa City as of June 3, 2021
Insight Author: Pia Mae M. Palay
Clone of System Dynamic Model of COVID 19 in Puerto Princesa City
SARS-CoV-19 spread in different countries
- please
adjust variables accordingly
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
Clone of SARS-CoV-19 model
Evolution of Covid-19 in Brazil:
A System Dynamics Approach
Villela, Paulo (2020)
paulo.villela@engenharia.ufjf.br
This model is based on Crokidakis, Nuno. (2020). Data analysis and modeling of the evolution of COVID-19 in Brazil. For more details see full paper here.
Clone of Evolution of Covid-19 in Brazil: A System Dynamics Approach
Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus
Clone of SEIR Infectious Disease Model for COVID-19
A sample model for class discussion modeling COVID-19 outbreaks and responses from government with the effect on the local economy. Govt policy is dependent on reported COVID-19 cases, which in turn depend on testing rates less those who recover
Assumptions
Govt policy reduces infection and economic growth in the same way.
Govt policy is trigger when reported COVID-19 case are 10 or less.
A greater number of COVID-19 cases has a negative effect on the economy. This is due to economic signalling that all is not well.
Interesting insights
Higher testing rates seem to trigger more rapid government intervention, which reduces infectious cases. The impact on the economy though of higher detected cases though is negative.
Clone of Burnie COVID-19 outbreak demo model version 2
Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus
Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of SEIR Infectious Disease Model for COVID-19
A simple feedback loop of the COVID-19 pandemic.
Clone of COVID-19 feedback loops
Simple epidemiological model for Burnie, Tasmania
SIR: Susceptible to infection - Infected - Recovery, Government responses and Economic impacts
Government policy is activated when there are 10 or fewer reported cases of COVID-19. The more people tested, the fewer people became infected. So the government's policy is to reduce infections by increasing the number of people tested and starting early. At the same time, it has slowed the economic growth (which, according to the model, will stop for next 52 weeks).
Clone of Model of Covid-19 Outbreak in Burnie, Tasmania (Yue Xiang 512994)
A sample model for class discussion modeling COVID-19 outbreaks and responses from government with the effect on the local economy. Govt policy is dependent on reported COVID-19 cases, which in turn depend on testing rates less those who recover
Assumptions
Govt policy reduces infection and economic growth in the same way.
Govt policy is trigger when reported COVID-19 case are 10 or less.
A greater number of COVID-19 cases has a negative effect on the economy. This is due to economic signalling that all is not well.
Interesting insights
Higher testing rates seem to trigger more rapid government intervention, which reduces infectious cases. The impact on the economy though of higher detected cases though is negative.
Clone of Burnie COVID-19 outbreak demo model version 2
