SEIR Infectious Disease Model for COVID-19
Rolf Häsänen
Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus
- 1 month 2 weeks ago
SIR Infectious Disease Model
Geoff McDonnell ★
This is a simple SIR infectious diseases 3 stock model with Susceptibles, Infectives and Recovereds stocks. In the initial description the R signified Removed and could include Deaths, Recovered with immunity to infection (Resistant) or those who had fled the epidemic. Note the need to initiate the epidemic by adding a pulse of a single infected person at time 0. Compare with Bass Diffusion Model IM-610
- 4 years 9 months ago
SARS-CoV-19 model
Lucia Vega Resto
Italy
- elderly population (>65): 0.228
- estimated undetected cases factor: 4-11
- starting population size: 60 000 000
- high blood pressure: 0.32 (gbe-bund)
- heart disease: 0.04 (statista)
- free intensive care units: 3 100
Germany
- elderly population (>65): 0.195 (bpb)
- estimated undetected cases factor: 2-3 (deutschlandfunk)
- starting population size: 83 000 000
- high blood pressure: 0.26 (gbe-bund)
- heart disease: 0.2-0.28 (herzstiftung)
- free intensive care units: 5 880
France
- elderly population (>65): 0.183 (statista)
- estimated undetected cases factor: 3-5
- starting population size: 67 000 000
- high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
- heart disease: 0.1-0.2 (oecd)
- free intensive care units: 3 000
As you wish
- numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
- practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
- government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
- Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4
Key
- Healthy: People are not infected with SARS-CoV-19 but could still get it
- Infected: People have been infected and developed the disease COVID-19
- Recovered: People just have recovered from COVID-19 and can't get it again in this stage
- Dead: People died because of COVID-19
- Immune: People got immune and can't get the disease again
- Critical recovery percentage: Chance of survival with no special medical treatment
SARS-CoV-19 COVID-19 Corona Coronavirus Virus Disease Infection Pandemic
- 10 months 1 week ago
Upgrade of Kermack–McKendrick Epidemic SIR Infectious Disease Model - Metrics by Guy Lakeman
Guy Lakeman
Upgrade of Kermack–McKendrick Epidemic SIR Infectious Disease Model (circa 2015) - Metrics by Guy Lakeman
This is a simple SIR infectious diseases 3 stock model with Susceptibles, Infectives and Recovereds stocks. In the initial description the R signified Removed and could include Deaths, Recovered with immunity to infection (Resistant) or those who had fled the epidemic. Note the need to initiate the epidemic by adding a pulse of a single infected person at time 0.
Addition of a slider for susceptibles is equivalent to accumulated total cases
SARS, MERS AND COVID are similar virus types only differing in their sub genus
The COVID outbreak has reached 150,000 infected people
This simulation allows an attempt at predicting how long the virus will persist and its longevity dependence on its high speed massive infection numbers that have reached pandemic proportions
SARS reached 8,000 infected total and ran for 9 months before stopping
MERS 2012 is still killing 8 years later with patients dying even after using interferon to try and cure them
- 10 months 2 weeks ago
COVID-19 spread with containment measures
Pau Fonseca
Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus.
We add simple containment meassures that affect two paramenters, the Susceptible population and the rate to become infected.
The initial parametrization is based on the suggested current data. The initial population is set for Catalonia.
The questions that we want to answer in this kind of models are not the shape of the curves, that are almost known from the beginning, but, when this happens, and the amplitude of the shapes. This is crucial, since in the current circumstance implies the collapse of certain resources, not only healthcare.
The validation process hence becomes critical, and allows to estimate the different parameters of the model from the data we obtain. This simulation approach allows to obtain somethings that is crucial to make decisions, the causality. We can infer this from the assumptions that are implicit on the model, and from it we can make decisions to improve the system behavior.
Yes, simulation works with causality and Flows diagrams is one of the techniques we have to draw it graphically, but is not the only one. On https://sdlps.com/projects/documentation/1009 you can review soon the same model but represented in Specification and Description Language.
- 3 months 1 week ago
Kermack–McKendrick Epidemic SIR Infectious Disease Model - Metrics by Guy Lakeman
Guy Lakeman
Kermack–McKendrick Epidemic SIR Infectious Disease Model - Metrics by Guy Lakeman
This is a simple SIR infectious diseases 3 stock model with Susceptibles, Infectives and Recovereds stocks. In the initial description the R signified Removed and could include Deaths, Recovered with immunity to infection (Resistant) or those who had fled the epidemic. Note the need to initiate the epidemic by adding a pulse of a single infected person at time 0.
- 6 years 3 months ago
COVID-19 spread
Pau Fonseca
Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus.
The initial parametrization is based on the suggested current data. The initial population is set for Catalonia.
- 8 months 5 days ago
Ebola and Structural Violence
Geoff McDonnell ★
- 6 years 1 month ago
SEIR Infectious Disease Model
Geoff McDonnell ★
Here we have modified the SIR model of Insight 584 by adding an additional stock of Exposed people, who become Infective after an incubation period.
- 8 years 3 weeks ago
Scratchpad of Upgrade of Kermack–McKendrick Epidemic SIR Infectious Disease Model - Metrics by Guy Lakeman
Guy Lakeman
Upgrade of Kermack–McKendrick Epidemic SIR Infectious Disease Model (circa 2015) - Metrics by Guy Lakeman
This is a simple SIR infectious diseases 3 stock model with Susceptibles, Infectives and Recovereds stocks. In the initial description the R signified Removed and could include Deaths, Recovered with immunity to infection (Resistant) or those who had fled the epidemic. Note the need to initiate the epidemic by adding a pulse of a single infected person at time 0.
Addition of a slider for susceptibles is equivalent to accumulated total cases
SARS, MERS AND COVID are similar virus types only differing in their sub genus
The COVID outbreak has reached 150,000 infected people
This simulation allows an attempt at predicting how long the virus will persist and its longevity dependence on its high speed massive infection numbers that have reached pandemic proportions
SARS reached 8,000 infected total and ran for 9 months before stopping
MERS 2012 is still killing 8 years later with patients dying even after using interferon to try and cure them
updated 16/3/2020 from 5 years ago
Health Care Infection Ebola Epidemic SARS MERS COVID Pandemic
- 10 months 1 week ago
Vaccine Attitudes and Cultural Theory
Geoff McDonnell ★
- 6 years 1 month ago
Epidemic SIR Infectious Disease Model for 3 regions
Irena
Paprastas 3 regionų užkrėstumo modelis. Irena Gustytė.
- 5 years 1 week ago
SIR Model
Geoff McDonnell ★
- 6 years 9 months ago
SARS-CoV-19 Modell von Lucia Vega Resto
Hans Kratz
- bitte passen Sie die Variablen über die Schieberegler weiter unten entsprechend an
Italien
ältere Bevölkerung (>65): 0,228
Faktor der geschätzten unentdeckten Fälle: 0,6
Ausgangsgröße der Bevölkerung: 60 000 000
hoher Blutdruck: 0,32 (gbe-bund)
Herzkrankheit: 0,04 (statista)
Anzahl der Intensivbetten: 3 100
Deutschland
ältere Bevölkerung (>65): 0,195 (bpb)
geschätzte unentdeckte Fälle Faktor: 0,2 (deutschlandfunk)
Ausgangsgröße der Bevölkerung: 83 000 000
hoher Blutdruck: 0,26 (gbe-bund)
Herzkrankheit: 0,2-0,28 (Herzstiftung)
Anzahl der Intensivbetten: 5 880
Frankreich
ältere Bevölkerung (>65): 0,183 (statista)
Faktor der geschätzten unentdeckten Fälle: 0,4
Ausgangsgröße der Bevölkerung: 67 000 000
Bluthochdruck: 0,3 (fondation-recherche-cardio-vasculaire)
Herzkrankheit: 0,1-0,2 (oecd)
Anzahl der Intensivbetten: 3 000
Je nach Bedarf:
Anzahl der Begegnungen/Tag: 1 = Quarantäne, 2-3 = soziale Distanzierung , 4-6 = erschwertes soziales Leben, 7-9 = überhaupt keine Einschränkungen // Vorgabe 2
Praktizierte Präventivmassnahmen (d.h. sich regelmässig die Hände waschen, das Gesicht nicht berühren usw.): 0.1 (niemand tut etwas) - 1 (sehr gründlich) // Vorgabe 0.8
Aufklärung durch die Regierung: 0,1 (sehr schlecht) - 1 (sehr transparent und aufklärend) // Vorgabe 0,9
Immunitätsrate (aufgrund fehlender Daten): 0 (man kann nicht immun werden) - 1 (wenn man es einmal hatte, wird man es nie wieder bekommen) // Vorgabe 0,4
Schlüssel
Anfällige: Menschen sind nicht mit SARS-CoV-19 infiziert, könnten aber infiziert werden
Infizierte: Menschen sind infiziert worden und haben die Krankheit COVID-19
Geheilte: Die Menschen haben sich gerade von COVID-19 erholt und können es in diesem Stadium nicht mehr bekommen
Tote: Menschen starben wegen COVID-19
Immunisierte: Menschen wurden immun und können die Krankheit nicht mehr bekommen
Kritischer Prozentsatz der Wiederherstellung: Überlebenschance ohne spezielle medizinische Behandlung
SARS-CoV-19 COVID-19 Corona Coronavirus Virus Disease Infection Pandemic
- 4 months 3 weeks ago
Hospital Infection Factors Levels
Geoff McDonnell ★
- 6 years 10 months ago
ITS_831-Tutorial-1-Disease-Dynamics
Sai Krishnanand Nagavelli
Disease Dynamics Health Infection Immunity Rate Of Recovery.
- 11 months 3 weeks ago
Bourke Infection Rate
Pavel Burmakin
AssumptionsThis model assumes that:upper value for Sensitive to get infected is 50 peopleupper value for Placed into Bourke hospital is 50 peopleupper value for Released from Bourke hospital is 50 people
VariablesInfection Rate - can be adjusted upwards or downwards to stimulate infection rate.Infection Factor - can be adjusted upwards or downwards to stimulate infection rate.Recovery Rate - can be adjusted upwards or downwards to stimulate infection rate.
- 1 year 7 months ago
Ex2: SIR model
Rolf Widmer
- 8 months 3 weeks ago
Infection disease model
Carlos
- 10 months 1 week ago
Munz 2009 Zombie Infection
Todd Levine
- 8 years 3 months ago
Zombie Modeling + cannibalism
Alex
I'm adding a few things to the standard model:* zombies are carnivores* zombies, once the number of uninfected have significantly dropped, will start eating each other* zombies are in the throes of a fatal disease. In enough time, the disease (and secondary diseases) will kill them* if there's no one left to eat, the zombies will starve
- 6 years 11 months ago
Zombie Modeling
Coleen
- 7 years 2 months ago
メディア効果、病床数効果あり感染モデル
ShotaroOkamoto
バグ:病床使用率が1を超える陽性判定数が発症者の係数倍政策による効果の粒度が粗い
- 8 months 2 weeks ago
Zombie Modeling with Eradication
Coleen
- 7 years 2 months ago