COVID-19 | Insight Maker

A simple ABM example illustrating how the SEIR model works. It can be a basis for experimenting with learning the impact of human behavior on the spread of a virus, e.g. COVID-19.

Clone of SEIR ABM MODEL

kmolenda

Spring, 2020: in the midst of on-line courses, due to the pandemic of Covid-19.

With the onset of the Covid-19 coronavirus crisis, we focus on SIRD models, which might realistically model the course of the disease.

We start with an SIR model, such as that featured in the MAA model featured in

https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model

Without mortality, with time measured in days, with infection rate 1/2, recovery rate 1/3, and initial infectious population I_0=1.27x10-4, we reproduce their figure

With a death rate of .005 (one two-hundredth of the infected per day), an infectivity rate of 0.5, and a recovery rate of .145 or so (takes about a week to recover), we get some pretty significant losses -- about 3.2% of the total population.

Resources:

Clone of Coronavirus: A Simple SIR (Susceptible, Infected, Recovered) with death

Mitch Daniels

10 months ago

SARS-CoV-19 spread in different countries

- please adjust variables accordingly

Italy

elderly population (>65): 0.228
estimated undetected cases factor: 4-11
starting population size: 60 000 000
high blood pressure: 0.32 (gbe-bund)
heart disease: 0.04 (statista)
free intensive care units: 3 100

Germany

elderly population (>65): 0.195 (bpb)
estimated undetected cases factor: 2-3 (deutschlandfunk)
starting population size: 83 000 000
high blood pressure: 0.26 (gbe-bund)
heart disease: 0.2-0.28 (herzstiftung)
free intensive care units: 5 880

France

elderly population (>65): 0.183 (statista)
estimated undetected cases factor: 3-5
starting population size: 67 000 000
high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
heart disease: 0.1-0.2 (oecd)
free intensive care units: 3 000

As you wish

numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4

Key

Healthy: People are not infected with SARS-CoV-19 but could still get it
Infected: People have been infected and developed the disease COVID-19
Recovered: People just have recovered from COVID-19 and can't get it again in this stage
Dead: People died because of COVID-19
Immune: People got immune and can't get the disease again
Critical recovery percentage: Chance of survival with no special medical treatment

Clone of SARS-CoV-19 model

Lucia Vega Resto

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Anchal Patil

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of Clone of SEIR Infectious Disease Model for COVID-19

juan jose

9

The SEIRS(D) model for the purpose of experimenting with the phenomena of viral spread. I use it for COVID-19 simulation.

Clone of SEIR - COVID-19 (v.1)

M Rifat Bagus A 24_16

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Анастасия

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Michał S

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Faqih Zulfikar

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Carlos Morocho

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Ngaliman Abu Ibrahim

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Putro Bee

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Yustika Athiya Hasna

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of Clone of SEIR Infectious Disease Model for COVID-19

juan jose

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Jingyi Qiu

SARS-CoV-19 spread in different countries

- please adjust variables accordingly

Italy

elderly population (>65): 0.228
estimated undetected cases factor: 4-11
starting population size: 60 000 000
high blood pressure: 0.32 (gbe-bund)
heart disease: 0.04 (statista)
free intensive care units: 3 100

Germany

elderly population (>65): 0.195 (bpb)
estimated undetected cases factor: 2-3 (deutschlandfunk)
starting population size: 83 000 000
high blood pressure: 0.26 (gbe-bund)
heart disease: 0.2-0.28 (herzstiftung)
free intensive care units: 5 880

France

elderly population (>65): 0.183 (statista)
estimated undetected cases factor: 3-5
starting population size: 67 000 000
high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
heart disease: 0.1-0.2 (oecd)
free intensive care units: 3 000

As you wish

numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4

Key

Healthy: People are not infected with SARS-CoV-19 but could still get it
Infected: People have been infected and developed the disease COVID-19
Recovered: People just have recovered from COVID-19 and can't get it again in this stage
Dead: People died because of COVID-19
Immune: People got immune and can't get the disease again
Critical recovery percentage: Chance of survival with no special medical treatment

Clone of SARS-CoV-19 model

Isaiah Ritzmann

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

James Butler

The SEIRS(D) model for the purpose of experimenting with the phenomena of viral spread. I use it for COVID-19 simulation.

Clone of SEIR - COVID-19 (v.1)

TrungD

Modelling of the SARS-Cov-2 viral outbreak using an SEIR model plus specific extensions to model demand for health and care resources.

The model includes biths and deaths, and migration to accommodate import and export of infected individuals from other areas.

Healthcare resources identifies need for hospital beds and critical care.

The model is uses arrays to reflect the different impacts of modelled parameters by age and sex.

Clone of Infectious Disease Model (Covid)

Michael F O'brien

Here we have a basic SEIR model and we will investigate what changes would be appropriate for modelling the 2019 Coronavirus

Clone of SEIR Infectious Disease Model for COVID-19

Krisna Mughni

Modelling of the SARS-Cov-2 viral outbreak using an SEIR model plus specific extensions to model demand for health and care resources.

The model includes biths and deaths, and migration to accommodate import and export of infected individuals from other areas.

Healthcare resources identifies need for hospital beds and critical care.

The model is uses arrays to reflect the different impacts of modelled parameters by age and sex.

Clone of Infectious Disease Model (Covid)

Doan Thi Nhat Minh

Spring, 2020: in the midst of on-line courses, due to the pandemic of Covid-19.

With the onset of the Covid-19 coronavirus crisis, we focus on SIRD models, which might realistically model the course of the disease.

We start with an SIR model, such as that featured in the MAA model featured in

https://www.maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model

Without mortality, with time measured in days, with infection rate 1/2, recovery rate 1/3, and initial infectious population I_0=1.27x10-4, we reproduce their figure

With a death rate of .005 (one two-hundredth of the infected per day), an infectivity rate of 0.5, and a recovery rate of .145 or so (takes about a week to recover), we get some pretty significant losses -- about 3.2% of the total population.

Resources:

Clone of Coronavirus: A Simple SIR (Susceptible, Infected, Recovered) with death

Jon Ford

SARS-CoV-19 spread in different countries

- please adjust variables accordingly

Italy

elderly population (>65): 0.228
estimated undetected cases factor: 4-11
starting population size: 60 000 000
high blood pressure: 0.32 (gbe-bund)
heart disease: 0.04 (statista)
free intensive care units: 3 100

Germany

elderly population (>65): 0.195 (bpb)
estimated undetected cases factor: 2-3 (deutschlandfunk)
starting population size: 83 000 000
high blood pressure: 0.26 (gbe-bund)
heart disease: 0.2-0.28 (herzstiftung)
free intensive care units: 5 880

France

elderly population (>65): 0.183 (statista)
estimated undetected cases factor: 3-5
starting population size: 67 000 000
high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
heart disease: 0.1-0.2 (oecd)
free intensive care units: 3 000

As you wish

numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4

Key

Healthy: People are not infected with SARS-CoV-19 but could still get it
Infected: People have been infected and developed the disease COVID-19
Recovered: People just have recovered from COVID-19 and can't get it again in this stage
Dead: People died because of COVID-19
Immune: People got immune and can't get the disease again
Critical recovery percentage: Chance of survival with no special medical treatment

Clone of SARS-CoV-19 model

Valentin Balseanu

SARS-CoV-19 spread in different countries

- please adjust variables accordingly

Italy

elderly population (>65): 0.228
estimated undetected cases factor: 4-11
starting population size: 60 000 000
high blood pressure: 0.32 (gbe-bund)
heart disease: 0.04 (statista)
free intensive care units: 3 100

Germany

elderly population (>65): 0.195 (bpb)
estimated undetected cases factor: 2-3 (deutschlandfunk)
starting population size: 83 000 000
high blood pressure: 0.26 (gbe-bund)
heart disease: 0.2-0.28 (herzstiftung)
free intensive care units: 5 880

France

elderly population (>65): 0.183 (statista)
estimated undetected cases factor: 3-5
starting population size: 67 000 000
high blood pressure: 0.3 (fondation-recherche-cardio-vasculaire)
heart disease: 0.1-0.2 (oecd)
free intensive care units: 3 000

As you wish

numbers of encounters/day: 1 = quarantine, 2-3 = practicing social distancing, 4-6 = heavy social life, 7-9 = not caring at all // default 2
practicing preventive measures (ie. washing hands regularly, not touching your face etc.): 0.1 (nobody does anything) - 1 (very strictly) // default 0.8
government elucidation: 0.1 (very bad) - 1 (highly transparent and educating) // default 0.9
Immunity rate (due to lacking data): 0 (you can't get immune) - 1 (once you had it you'll never get it again) // default 0.4

Key

Healthy: People are not infected with SARS-CoV-19 but could still get it
Infected: People have been infected and developed the disease COVID-19
Recovered: People just have recovered from COVID-19 and can't get it again in this stage
Dead: People died because of COVID-19
Immune: People got immune and can't get the disease again
Critical recovery percentage: Chance of survival with no special medical treatment

Clone of SARS-CoV-19 model

Isaiah Ritzmann

COVID-19 Models