This model is a classic simulation of the production cycle in the ocean, including the effects of the thermocline in switching off advection of dissolved nutrients and detritus to the surface layer.

It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.

The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:

Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
 
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.

This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.

This model is a classic simulation of the production cycle in the ocean, including the effects of the thermocline in switching off advection of dissolved nutrients and detritus to the surface layer.

It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.

The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:

Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
 
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.

This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.

General global ocean box model, including isotopes.

This model uses simple functions (converters, cosine) to simulate the water balance inside a reservoir.

Harvested fishery with endogenous investment and ship deployment policy. Ch 9 p345-360 John Morecroft (2007) Strategic Modelling and Business Dynamics. See simpler models at IM-2990 and IM-2991

Model created by Scott Fortmann-Roe.  This model illustrates predator prey interactions using real-life data of wolf and moose populations on the Isle Royale.

Experiment with adjusting the initial number of moose and wolves on the island.

It seems that I've made a mess of mine! But it's a mess with a purpose....

This model illustrates predator prey interactions using real-life data of wolf and moose populations on the Isle Royale.

Experiment with adjusting the initial number of moose and wolves on the island.

This insight maker depicts the correlations between energy supply and water use in desalination potential in South Africa. 

homework assignment for mrs.chong

Marine plastic is rapidly increasing due to increasing production and use of plastic in all economic activities, short use times and long life times of plastic, and large mismanagement of plastic waste. With this, the threat plastic poses to the marine biosphere is also increasing and will continue to increase over a long time into the future. Risk knowledge is limited and risk perception and awareness are not resulting in significant mitigation efforts. The case study will aim at modeling the use and life cycles of plastic and the transport paths that lead to plastic entering the ocean. The models will be used to simulate possible futures based on a scenario approach. The results of these efforts will be visualized with the goal to increase risk awareness.

Primitives for Watershed modeling project. Click Clone Insight at the top right to make a copy that you can edit.

The converter in this file contains precipitation for Tucson only. Tucson watersheds are Arroyo Chico, Canada Agua, and Lower Canada del Oro.

Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.

Eastern oyster growth model calibrated for Long Island Sound

This is a one box model for an idealized farm with one million oysters seeded (one hectare @ a stocking density of 100 oysters per square meter)

1. Run WinShell individual growth model for one year with Long Island Sound growth drivers;

2. Determine the scope for growth (in dry tissue weight per day) for oysters centered on the five weight classes)
 
3. Apply a classic population dynamics equation:

dn(s,t)/dt = -d[n(s,t)g(s,t)]/ds - u(s)n(s,t)

s: Weight (g)
t: Time
n: Number of individuals of weight s
g: Scope for growth (g day-1)
u: Mortality rate (day-1)

4. Set mortality at 30% per year, slider allows scenarios from 30% to 80% per year

5. Determine harvestable biomass, i.e. weight class 5, 40-50 g (roughly three inches length)

Simple model to illustrate an annual cycle for phytoplankton biomass in temperate waters.
Potential primary production uses Steele's equation and a Michaelis-Menten (or Monod) function for nutrient limitation. Respiratory losses are only a function of biomass.

Testing for MSc

A simulation illustrating simple predator prey dynamics. You have two populations.

This model is a classic simulation of the production cycle in the ocean, including the effects of the thermocline in switching off advection of dissolved nutrients and detritus to the surface layer.

It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.

The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:

Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
 
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.

This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.

Simple mass balance model for lakes, based on the Vollenweider equation:

dMw/dt = Min - sMw - Mout

The model was first used in the 1960s to determine the phosphorus concentration in lakes and reservoirs for eutrophication assessment.

This version adds diagenesis, using an extra state variable (phosphorus in the sediment) and incorporates desorption processes that release phosphorus trapped in the sediment back to the water column.

The temporal dynamics of the model simulate the typical development of pollution in time.

1. Low loading, low P concentration in lake
2. High loading, increasing P concentration in lake
3. Desorption rate is low, P in sediment increases
4. Measures implemented for source control, loading reduces
5. P in lake gradually decreases, but below a certain point, desorption increases, and lake P concentration does not improve
6. Recovery only occurs when the secondary load in the sediment is strongly reduced.

Simulates Ag biogeochemical cycling using data from Rauch and Pacyna (2009). This Insight forms part of the engaged lear​ning exercise for a SESYNC case study about the human relationship with silver as a natural resource throughout history.

Sandusky Treatment Plant for Arsenic and Water purification