A simple model of honey bee hive population. Not a very good match to reality at this point.
A simple model of honey bee hive population. Not a very good match to reality at this point.
 From the Plausibility of life  book  esp p 220-227  Constraints that deconstrain

From the Plausibility of life book esp p 220-227  Constraints that deconstrain

2 months ago
Un modello per l'effetto della temperatura (costante) sulla crescita di un pericoloso patogeno, agente di tossinfezioni alimentari (Listeria monocytogenes)    __  Il modello è basato su questo Insight https://insightmaker.com/insight/206861/D-model-curve-di-Richards-con-ln-alpha-lag-mu
Un modello per l'effetto della temperatura (costante) sulla crescita di un pericoloso patogeno, agente di tossinfezioni alimentari (Listeria monocytogenes)

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Il modello è basato su questo Insight https://insightmaker.com/insight/206861/D-model-curve-di-Richards-con-ln-alpha-lag-mu
77 2 weeks ago
Questo modello usa un'altra ipotesi per la natura (e durata della fase lag). La popolazione N è composta da una frazione di cellule che non crescono NG e una di cellule che crescono immediatamente alla massima velocità, G. Il rapporto fra le due frazioni determina la durata della fase lag
Questo modello usa un'altra ipotesi per la natura (e durata della fase lag). La popolazione N è composta da una frazione di cellule che non crescono NG e una di cellule che crescono immediatamente alla massima velocità, G. Il rapporto fra le due frazioni determina la durata della fase lag
stock flow diagram illustrating the lac operon
stock flow diagram illustrating the lac operon
 FORCED GROWTH GROWTH GOES INTO TURBULENT CHAOTIC DESTRUCTION     BEWARE pushing increased growth blows the system!    (governments are trying to push growth on already unstable systems !)  The existing global capitalistic growth paradigm is totally flawed  The chaotic turbulence is the result of th
FORCED GROWTH GROWTH GOES INTO TURBULENT CHAOTIC DESTRUCTION 
 BEWARE pushing increased growth blows the system!
(governments are trying to push growth on already unstable systems !)

The existing global capitalistic growth paradigm is totally flawed

The chaotic turbulence is the result of the concept and flawed strategy of infinite bigness this has been the destructive influence on all empires and now shown up by Feigenbaum numbers and Dunbar numbers for neural netwoirks

See Guy Lakeman Bubble Theory for more details on keeping systems within finite limited size working capacity containers (villages communities)

    Dynamic simulation modelers are particularly interested in understanding and being able to distinguish between the behavior of stocks and flows that result from internal interactions and those that result from external forces acting on a system.  For some time modelers have been particularly int

Dynamic simulation modelers are particularly interested in understanding and being able to distinguish between the behavior of stocks and flows that result from internal interactions and those that result from external forces acting on a system.  For some time modelers have been particularly interested in internal interactions that result in stable oscillations in the absence of any external forces acting on a system.  The model in this last scenario was independently developed by Alfred Lotka (1924) and Vito Volterra (1926).  Lotka was interested in understanding internal dynamics that might explain oscillations in moth and butterfly populations and the parasitoids that attack them.  Volterra was interested in explaining an increase in coastal populations of predatory fish and a decrease in their prey that was observed during World War I when human fishing pressures on the predator species declined.  Both discovered that a relatively simple model is capable of producing the cyclical behaviors they observed.  Since that time, several researchers have been able to reproduce the modeling dynamics in simple experimental systems consisting of only predators and prey.  It is now generally recognized that the model world that Lotka and Volterra produced is too simple to explain the complexity of most and predator-prey dynamics in nature.  And yet, the model significantly advanced our understanding of the critical role of feedback in predator-prey interactions and in feeding relationships that result in community dynamics.The Lotka–Volterra model makes a number of assumptions about the environment and evolution of the predator and prey populations:

1. The prey population finds ample food at all times.
2. The food supply of the predator population depends entirely on the size of the prey population.
3. The rate of change of population is proportional to its size.
4. During the process, the environment does not change in favour of one species and genetic adaptation is inconsequential.
5. Predators have limitless appetite.
As differential equations are used, the solution is deterministic and continuous. This, in turn, implies that the generations of both the predator and prey are continually overlapping.[23]

Prey
When multiplied out, the prey equation becomes
dx/dtαx - βxy
 The prey are assumed to have an unlimited food supply, and to reproduce exponentially unless subject to predation; this exponential growth is represented in the equation above by the term αx. The rate of predation upon the prey is assumed to be proportional to the rate at which the predators and the prey meet; this is represented above by βxy. If either x or y is zero then there can be no predation.

With these two terms the equation above can be interpreted as: the change in the prey's numbers is given by its own growth minus the rate at which it is preyed upon.

Predators

The predator equation becomes

dy/dt =  - 

In this equation, {\displaystyle \displaystyle \delta xy} represents the growth of the predator population. (Note the similarity to the predation rate; however, a different constant is used as the rate at which the predator population grows is not necessarily equal to the rate at which it consumes the prey). {\displaystyle \displaystyle \gamma y} represents the loss rate of the predators due to either natural death or emigration; it leads to an exponential decay in the absence of prey.

Hence the equation expresses the change in the predator population as growth fueled by the food supply, minus natural death.


Summary of evolution and the modern synthesis with genetics. See also the more recent extended synthesis  IM-2099
Summary of evolution and the modern synthesis with genetics. See also the more recent extended synthesis IM-2099
 Nested multilevel inquiry across multiple levels of organization of biology concepts. Adapted from Knippels (2002) PhD Thesis at http://bit.ly/GGcKo1 . Note the similarity to the nested adaptive cycles of socio-ecological systems in IM 1169

Nested multilevel inquiry across multiple levels of organization of biology concepts. Adapted from Knippels (2002) PhD Thesis at http://bit.ly/GGcKo1 . Note the similarity to the nested adaptive cycles of socio-ecological systems in IM 1169

Small Intestine example from Progress in Biophysics & Molecular Biology Special Issue 2016 From the century of the genome to the century of the organism: New theoretical approaches  paper  on organization. Compare with Bogdanov
Small Intestine example from Progress in Biophysics & Molecular Biology Special Issue 2016 From the century of the genome to the century of the organism: New theoretical approaches paper on organization. Compare with Bogdanov
From Fig 12.2 p317 Pigliucci M and Muller GB (2010) Evolution: The Extended Synthesis
From Fig 12.2 p317 Pigliucci M and Muller GB (2010) Evolution: The Extended Synthesis
 ​From Fig 1.1 p11  Pigliucci M and Muller GB (2010)  Evolution: The Extended Synthesis . This is a shift in emphasis from statistical correlation to mechanistic causation (p12), including the conditions for the origin and innovation of traits (p13). It overcomes the  gradualism, externalism and gen

​From Fig 1.1 p11  Pigliucci M and Muller GB (2010) Evolution: The Extended Synthesis. This is a shift in emphasis from statistical correlation to mechanistic causation (p12), including the conditions for the origin and innovation of traits (p13). It overcomes the gradualism, externalism and gene centrism of the Modern Synthesis. Non-gradual change is a property of complex dynamical systems. EvoDevo processes generate particular forms of change rather than others.Genes are followers in the evolutionary process that capture the emergent interactions among environment, development and inheritance into genetic-epigenetic circuits, which are passed to and elaborated on in subsequent generations (p14).

Un modello minimo per la crescita esponenziale di una popolazione microbica
Un modello minimo per la crescita esponenziale di una popolazione microbica
This simulation shows how plant, deer and wolf populations impact each other in a deciduous forest ecosystem.
This simulation shows how plant, deer and wolf populations impact each other in a deciduous forest ecosystem.
Un modello minimo per la crescita esponenziale di una popolazione microbica
Un modello minimo per la crescita esponenziale di una popolazione microbica
An attempt to model the allegation that over-consumption of calcium causes osteoporosis.
An attempt to model the allegation that over-consumption of calcium causes osteoporosis.
A simple and easy to follow model of how fertility and mortality affect a population, using ferns as an example.
A simple and easy to follow model of how fertility and mortality affect a population, using ferns as an example.