Insight diagram
This model uses simple functions (converters, cosine) to simulate the water balance inside a reservoir.
Clone of Water balance in a reservoir
Insight diagram
This model shows the growth of two organisms competing for a limiting resource (space) .
2-Daisy Growth
Insight diagram
Simple model to illustrate Michaelis-Menten equation for nutrient uptake by phytoplankton.

The equation is:

P = Ppot S / (Ks + S)

Where:

P: Nutrient-limited production (e.g. d-1, or mg C m-2 d-1)
Ppot: Potential production (same units as P)
S: Nutrient concentation (e.g. umol N L-1)
Ks: Half saturation constant for nutrient (same units as S)

The model contains no state variables, just illustrates the rate of production, by making the value of S equal to the timestep (in days). Move the slider to the left for more pronounced hyperbolic response, to the right for linear response.
Clone of Phyto 2 - Michaelis-Menten curve for phytoplankton
Insight diagram
Simple model to illustrate Steele's equation for primary production of phytoplankton.

The equation is:

Ppot = Pmax I/Iopt exp(1-I/Iopt)

Where:

Ppot: Potential production (e.g. d-1, or mg C m-2 d-1)
Pmax: Maximum production (same units as Ppot)
I: Light energy at depth of interest (e.g. uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (same units as I)

The model contains no state variables, just illustrates the rate of production, by making the value of I equal to the timestep (in days). Move the slider to the left for more pronounced photoinhibition, to the right for photosaturation.
Clone of Clone of Phyto 1 - PI curve for phytoplankton
Insight diagram
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.


Clone of Clone of micro algae , biogas , bioelectrcidades
Insight diagram
Simple model to illustrate Michaelis-Menten equation for nutrient uptake by phytoplankton.

The equation is:

P = Ppot S / (Ks + S)

Where:

P: Nutrient-limited production (e.g. d-1, or mg C m-2 d-1)
Ppot: Potential production (same units as P)
S: Nutrient concentation (e.g. umol N L-1)
Ks: Half saturation constant for nutrient (same units as S)

The model contains no state variables, just illustrates the rate of production, by making the value of S equal to the timestep (in days). Move the slider to the left for more pronounced hyperbolic response, to the right for linear response.
Clone of Phyto 2 - Michaelis-Menten curve for phytoplankton
Insight diagram
Simple modern carbon cycle model for use in virtual education modules.
Carbon Cycle
Insight diagram
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.


Clone of micro algae , biogas , bioelectrcidades
Insight diagram
Simple model to illustrate Michaelis-Menten equation for nutrient uptake by phytoplankton.

The equation is:

P = Ppot S / (Ks + S)

Where:

P: Nutrient-limited production (e.g. d-1, or mg C m-2 d-1)
Ppot: Potential production (same units as P)
S: Nutrient concentation (e.g. umol N L-1)
Ks: Half saturation constant for nutrient (same units as S)

The model contains no state variables, just illustrates the rate of production, by making the value of S equal to the timestep (in days). Move the slider to the left for more pronounced hyperbolic response, to the right for linear response.
Clone of Phyto 2 - Michaelis-Menten curve for phytoplankton
Insight diagram

My model is on global population and its impact on the availability of natural resources. The stocks in my system include food availability, soil resources and water resource availability. One question I believe my model can address is, what are the connections between food availability, soil resources and water resource availability; or in other words, are these stocks influenced equally by variables?  I hope to show a direct correlation between all three of these stocks. Food availability as stated in The Impact of Population Growth on Food Supplies and the Environment stated that, “The continued production of an adequate food supply is directly dependent on ample fertile land, fresh water, energy, plus the maintenance of biodiversity.” As population continues to grow so will the inputs to natural resources including water, fertilizer, and the need to have more available land.  What is more astonishing is that if these natural resources are never completely tapped dry, on a per capita perspective availability these resources will decline on astronomical levels since it has to be split amongst people (Pimental et al, 1996).



The flows in my system include food production,drought, water pollution, and greenhouse gases. I picked drought as a flow since it directly impacts the level of water available. Take for instance in California, the five year drought has caused scarcity and triggered state-wide executive orders to conserve water (California Department of Water Resources, 2017). Drought and water pollution can be affected by the number of people living in a country, which is why I picked these elements as flows. Furthermore food production, water pollution and greenhouse gases have strong influences on the availability of natural resources.


I picked mortality rates, birth rates, water scarcity, and industrial development as my variables. Since birth rates and mortality rates vary depending on the country I picked these as variables on my system since population growth is influenced by these variables.   Impact of Population Growth describes how the U. S. is already being affected by population growth, as stated here, “In populous industrial nations such as the United States, most economies of scale are already being exploited; we are on the diminishing returns part of most of the important curves.”


I have decided to change “developed countries” and undeveloped countries” as stocks to variables since these factors actually act more like variables. One question I hope to address with my model is how developed countries can  reduce their impact on resources? Furthermore, Population growth rate does depend on whether a country is developed versus undeveloped, so a country's level of economic development is more of a variable. I have decided to change food production from a stock to a flow, since it seems to be more of a flow that might affect the level of a stock of available food. I have also changed water scarcity from a stock to a variable because it actually affects the flow of water into an overall stock of fresh drinking water


Global Population Affects on Natural Resources
Insight diagram
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.


Clone of Clone of Clone of micro algae , biogas , bioelectrcidades
Insight diagram
Dissolved oxygen mass balance in a tide pool, forced by tides and light.
Tide pool dissolved oxygen model
Insight diagram
Simple energy balance model of a planet with albedo, ocean, and atmosphere.

This simulation models the stock and flow of energy between a star, a planet’s surface (primarily its oceans, which are the largest reservoir of heat), and space.The assumptions governing this model are:

1. The planet absorbs a fraction of the shortwave radiation arriving from its star, with that fraction given by (1-A), where A is albedo. 

2. The planet radiates longwave infrared radiation into space, with the amount of radiation into space given by σΤe4, where σ is the Stefan-Boltzmann constant and Te is the temperature of the effective radiating level.

3. The atmospheric lapse rate is 6 K/km.

4. If there is an imbalance between shortwave radiation absorbed and longwave radiation emitted, the imbalance affects the temperature of the planet. However, it does not do so instantaneously – the imbalance must heat or cool the mixed layer of the ocean.

5. At the start of the simulation, the planet is extremely close to equilibrium given its default parameters. If any of these parameters are changed, the planet will be out of equilibrium, and will have to adjust.

Simple Energy Balance Model
Insight diagram
Food Security and Climate Change in East Africa
Insight diagram
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.


micro algae , biogas , bioelectrcidades
Insight diagram
This model is a classic simulation of the production cycle in the ocean, including the effects of the thermocline in switching off advection of dissolved nutrients and detritus to the surface layer.

It illustrates a number of interesting features including the coupling of three state variables in a closed cycle, the use of time to control the duration of advection, and the modulus function for cycling annual temperature data over multiple years.

The model state variables are expressed in nitrogen units (mg N m-3), and the calibration is based on:

Baliño, B.M. 1996. Eutrophication of the North Sea, 1980-1990: An evaluation of anthropogenic nutrient inputs using a 2D phytoplankton production model. Dr. scient. thesis, University of Bergen.
 
Fransz, H.G. & Verhagen, J.H.G. 1985. Modelling Research on the Production Cycle of Phytoplankton in the Southern Bight of the Northn Sea in Relation to Riverborne Nutrient Loads. Netherlands Journal of Sea Research 19 (3/4): 241-250.

This model was first implemented in PowerSim some years ago by one of my M.Sc. students, who then went on to become a Buddhist monk. Although this is a very Zen model, as far as I'm aware, the two facts are unrelated.
Clone of NPD model (Nutrients, Phytoplankton, Detritus)
Insight diagram
Simple model to illustrate oyster growth based on primary production of Phytoplankton as a state variable, forced by light and nutrients, running for a yearly period.

Phytoplankton growth based on on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Further developments:
- Nutrients as state variable in cycle with detritus from phytoplankton and oyster biomass.
- Light limited by the concentration of phytoplankton.
- Temperature effect on phytoplankton and Oyster growth.


Clone of Clone of micro algae , biogas , bioelectrcidades
Insight diagram
In Chile, 60% of its population are exposed to levels of Particulate Matter (PM) above international standards. Air Pollution is causing 4,000 premature deaths per year, including health costs over US$8 billion.

The System Dynamics Causal Loop Diagram developed herein shows an initial study of the dynamics among the variables that influences the accumulation of PM in the air, in particular the case of Temuco, in the South of Chile. In Temuco, 97% of the PM inventories comes from the combustion of low quality firewood, which in turns is being burned due to its low price and cultural habits/tradition.
Clone of Clone of Air Pollution Dynamics - Firewood Combustion
Insight diagram
Combining electromobility and renewable energies since 2014.

http://www.amsterdamvehicle2grid.nl/

Clone of Amsterdam V2G simulation 2.0
Insight diagram

This story presents a conceptual model of nitrogen cycling in a dune-lake system in the Northland region of New Zealand. It is based on the concept of a stock and flow diagram. Each orange ellipse represents an input, while each blue box represents a stock. Each arrow represents a flow. A flow involves a loss from the stock at which it starts and an addition to the stock at which it ends.

Story of nitrogen dynamics in a shallow lake
Insight diagram
Simple model to illustrate a simple simulation of the microalgae biomass production, focusing on the dependent variables such as light, nutrients and other factor that is running for a yearly period.

The biomass model uses an example, Phytoplankton growth based on Steele's and Michaelis-Menten equations), where: 

Primary Production=(([Pmax]*[I]/[Iopt]*exp(1-[I]/[Iopt])*[S])/([Ks]+[S]))

Pmax: Maximum production (d-1)
I: Light energy at depth of interest (uE m-2 s-1)
Iopt: Light energy at which Pmax occurs (uE m-2 s-1)
S: Nutrient concentration (umol N L-1)
Ks: Half saturation constant for nutrient (umol N L-1).

Once this is understood, it looks upon the viability of biogas production from the microalgae biomass.


Clone of Clone of Clone3f micro algae , biogas and bioelectricity
Insight diagram
In Chile, 60% of its population are exposed to levels of Particulate Matter (PM) above international standards. Air Pollution is causing 4,000 premature deaths per year, including health costs over US$8 billion.

The System Dynamics Causal Loop Diagram developed herein shows an initial study of the dynamics among the variables that influences the accumulation of PM in the air, in particular the case of Temuco, in the South of Chile. In Temuco, 97% of the PM inventories comes from the combustion of low quality firewood, which in turns is being burned due to its low price and cultural habits/tradition.
Clone of Clone of Clone of Air Pollution Dynamics - Firewood Combustion
Insight diagram
This model adresses the primary production for phytoplankton growth, based on Steele’s light intensity equation and Michaelis-Menten equation for nutrient limitation.


Primary production of phytoplankton (SIMA2018_G1)
Insight diagram
A storytelling of the nitrogen cycle.
Met Nederlandse teksten
Nitrogen Cycle - Nederlands